install HDF5 and pytables in ubuntu

73,622

Solution 1

I found that installing the libhdf5-serial-dev with

  sudo apt-get install libhdf5-serial-dev

did the trick.

Solution 2

Search for the HDF5 library in the ubuntu package repository.

apt-cache search hdf5

The command will show the packages relating to hdf5.

install the relevant package to you.

sudo apt-get install package-name. 

mostly you have to install the hdf5-tools, h5utils, python-tables.

Solution 3

To be more precise, do two steps on Ubuntu

1) install hdf5

sudo apt-get install libhdf5-serial-dev

2) install pytables

pip install tables
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codeKiller
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codeKiller

Updated on September 17, 2020

Comments

  • codeKiller
    codeKiller over 3 years

    I am trying to install tables package in Ubuntu 14.04 but sems like it is complaining.

    I am trying to install it using PyCharm and its package installer, however seems like it is complaining about HDF5 package.

    However, seems like I cannnot find any hdf5 package to install before tables.

    Could anyone explain the procedure to follow?