matplotlib: using a colormap to color table-cell background

Question

I have a Pandas dataframe, and i want to plot it as matplotlib table. So far i have that part working with following code:

import numpy as np
randn = np.random.randn
from pandas import *

idx = Index(arange(1,11))
df = DataFrame(randn(10, 5), index=idx, columns=['A', 'B', 'C', 'D', 'E'])
vals = np.around(df.values,2)

fig = plt.figure(figsize=(15,8))
ax = fig.add_subplot(111, frameon=True, xticks=[], yticks=[])

the_table=plt.table(cellText=vals, rowLabels=df.index, colLabels=df.columns, 
                    colWidths = [0.03]*vals.shape[1], loc='center')

table_props = the_table.properties()
table_cells = table_props['child_artists']

clm = cm.hot(vals)

for cell in table_cells: 
    cell.set_height(0.04)
    # now i would like to set the backgroundcolor of the cell

At the end of this i would like to set the background-color of the cell according to the colormap - but how do i look it up in the clm array without an index?

Another question: can i somehow pass a format string to the table, so that it formats the text to 2 decimal places?

Any hints appreciated, Andy

Solution

You can use plt.Normalize() to normalize your data, and the pass the normalized data to a Colormap object, for example plt.cm.hot().

plt.table() has an argument cellColours, which will be used to set the cells' background color accordingly.

Because cm.hot maps black to the minimal value, I increased the value range when creating the normalization object.

Here is the code:

from matplotlib import pyplot as plt
import numpy as np
randn = np.random.randn
from pandas import *

idx = Index(np.arange(1,11))
df = DataFrame(randn(10, 5), index=idx, columns=['A', 'B', 'C', 'D', 'E'])
vals = np.around(df.values,2)
norm = plt.Normalize(vals.min()-1, vals.max()+1)
colours = plt.cm.hot(normal(vals))

fig = plt.figure(figsize=(15,8))
ax = fig.add_subplot(111, frameon=True, xticks=[], yticks=[])

the_table=plt.table(cellText=vals, rowLabels=df.index, colLabels=df.columns, 
                    colWidths = [0.03]*vals.shape[1], loc='center', 
                    cellColours=colours)
plt.show()

Comments

[user710]

Shouldn't normal(vals) be replaced with norm(vals)?