unable to install packages("caret") completely in R version 3.2.3

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I faced this problem as well on Windows 7. I did following steps in the sequence and it worked. a) Make sure your R version is updated latest R release 3.2.3 b) The default sources seems to be installing Unix version. So I manually downloaded https://cran.r-project.org/web/packages/pbkrtest/index.html for windows c) Use manually install function from R menu to install the package.

Cheers, Ratan

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Samuel Lee
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Samuel Lee

Updated on July 26, 2022

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  • Samuel Lee
    Samuel Lee almost 2 years
    > require("caret")
      Loading required package: caret
      Loading required package: lattice
      Loading required package: ggplot2
      Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck =      vI[[j]]) : 
       there is no package called ‘pbkrtest’
    

    So I found that there is lack of "pbkrtest" then I tried to reinstall it.

    > install.packages("pbkrtest")
     Installing package into ‘C:/Users/ADMIN/Documents/R/win-library/3.2’
     (as ‘lib’ is unspecified)
    
     There is a binary version available but the source version is
     later:
         binary source needs_compilation
     pbkrtest  0.4-2  0.4-3             FALSE
    
     installing the source package ‘pbkrtest’
    
    trying URL 'https://rweb.crmda.ku.edu/cran/src/contrib/pbkrtest_0.4-  3.tar.gz'
    Content type 'application/x-gzip' length 164415 bytes (160 KB)
    downloaded 160 KB
    
    * installing *source* package 'pbkrtest' ...
    ** package 'pbkrtest' successfully unpacked and MD5 sums checked
    ** R
    ** data
    ** inst
    ** preparing package for lazy loading
    Warning: replacing previous import by 'stats::sigma' when loading 'pbkrtest'
    Error : object 'sigma' is not exported by 'namespace:stats'
    ERROR: lazy loading failed for package 'pbkrtest'
    * removing 'C:/Users/ADMIN/Documents/R/win-library/3.2/pbkrtest'
    
    The downloaded source packages are in 
        ‘C:\Users\ADMIN\AppData\Local\Temp\Rtmpk7mJT0\downloaded_packages’
    Warning messages:
    1: running command '"D:/R-3.2.3/bin/x64/R" CMD INSTALL -l     
    "C:\Users\ADMIN\Documents\R\win-library\3.2"   
    
      C:\Users\ADMIN\AppData\Local\Temp\Rtmpk7mJT0/downloaded_packages/pbkrtest_0.4-  3.tar.gz' had status 1 
    2: In install.packages("pbkrtest") :
    installation of package ‘pbkrtest’ had non-zero exit status
    

    It seems like that the installation keeps failing. As a result, I couldn't use other code using caret packages.