How to assign a 1D numpy array to 2D numpy array?

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Do you really need to be able to handle both 1D and 2D inputs with the same function? If you know the input is going to be 1D, use

X[:, i] = x

If you know the input is going to be 2D, use

X[:, start:end] = x

If you don't know the input dimensions, I recommend switching between one line or the other with an if, though there might be some indexing trick I'm not aware of that would handle both identically.

Your x has shape (N,) rather than shape (N, 1) (or (1, N)) because numpy isn't built for just matrix math. ndarrays are n-dimensional; they support efficient, consistent vectorized operations for any non-negative number of dimensions (including 0). While this may occasionally make matrix operations a bit less concise (especially in the case of dot for matrix multiplication), it produces more generally applicable code for when your data is naturally 1-dimensional or 3-, 4-, or n-dimensional.

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Hanan Shteingart
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Hanan Shteingart

I am an entrepreneur and an Applied Researcher @ Microsoft Azure Security Group. I have a PhD in Computational Neuroscience (HUJI), MSc in Electrical Engineering and a BSc in both Physics and Electrical Engineering. I am the past chief scientist of BioCatch. personal home page

Updated on June 13, 2022

Comments

  • Hanan Shteingart
    Hanan Shteingart almost 2 years

    Consider the following simple example:

    X = numpy.zeros([10, 4])  # 2D array
    x = numpy.arange(0,10)    # 1D array 
    
    X[:,0] = x # WORKS
    
    X[:,0:1] = x # returns ERROR: 
    # ValueError: could not broadcast input array from shape (10) into shape (10,1)
    
    X[:,0:1] = (x.reshape(-1, 1)) # WORKS
    

    Can someone explain why numpy has vectors of shape (N,) rather than (N,1) ? What is the best way to do the casting from 1D array into 2D array?

    Why do I need this? Because I have a code which inserts result x into a 2D array X and the size of x changes from time to time so I have X[:, idx1:idx2] = x which works if x is 2D too but not if x is 1D.

  • brandones
    brandones almost 9 years
    Could you add some more commentary? It's not clear to me how you got here from the original code, and why this solves the problem.