Tensor Flow: Ran out of memory trying to allocate

Question

I am running Tensor Flow version 0.7.1, 64-bit GPU-enabled, installed with pip, and on a PC with Ubuntu 14.04. My issue is that Tensor Flow is running out of memory when building my network, even though based on my calculations, there should be sufficient room on my GPU.

Below is a minimal example of my code, which is based on the Tensor Flow MNIST tutorial. The network is a two-layer fully-connected network, and the number of nodes in the hidden layer is defined by the variable n. The size of the training minibatch is 1. Here is my code:

n = 23000

mnist = read_data_sets('MINST_Data', one_hot=True)
session = tf.InteractiveSession()
x = tf.placeholder(tf.float32, [None, 784])
W1 = tf.Variable(tf.truncated_normal([784, n], stddev=0.1))
b1 = tf.Variable(tf.constant(0.1, shape=[n]))
nn1 = tf.matmul(x, W1) + b1
W2 = tf.Variable(tf.truncated_normal([n, 10], stddev=0.1))
b2 = tf.Variable(tf.constant(0.1, shape=[10]))
nn2 = tf.matmul(nn1, W2) + b2
y = tf.nn.softmax(nn2)
y_ = tf.placeholder(tf.float32, [None, 10])
cross_entropy = -tf.reduce_sum(y_*tf.log(y))
train_step = tf.train.AdamOptimizer(1e-4).minimize(cross_entropy)
correct_prediction = tf.equal(tf.argmax(y,1), tf.argmax(y_,1))
accuracy = tf.reduce_mean(tf.cast(correct_prediction, tf.float32))

init = tf.initialize_all_variables()
sess = tf.Session()
sess.run(init)
for i in range(1000):
  batch_xs, batch_ys = mnist.train.next_batch(1)
  sess.run(train_step, feed_dict={x: batch_xs, y_: batch_ys})

Now, if n <= 22000, then the network runs fine. However, if n >= 23000, I get the following error:

W tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:211] Ran out of memory trying to allocate 877.38MiB.  See logs for memory state
W tensorflow/core/kernels/cwise_ops_common.cc:56] Resource exhausted: OOM when allocating tensor with shape[10000,23000]

However, according to my calculations, there should not be a problem with the memory. The number of parameters in the network is as follows:

First layer weights: 784 * n
First layer biases: n
Second layer weights: 10 * n
Second layer biases: 10
Total: 795n + 10

So with n = 23000, and using float32 data, the total memory required for the network should therefore be 73.1 MB.

Now, my graphics card is the NVIDIA GeForce GTX 780 Ti, which has 3072 MB of memory. After finding my graphics card, Tensor Flow prints out the following:

Total memory: 3.00GiB
Free memory: 2.32GiB

So, there should be around 2.32 GB memory available, which is far greater than the 73.1 MB calculated above. The minibatch size is 1, so this has minimal effect. Why am I getting this error?

---

I have also now tried this on my laptop, which has an NVida GeForce GTX 880M GPU. Here, Tensor Flow reads out Free memory: 7.60GiB. Running the same code as above, it gives me a memory error at around n = 700,000, which is equivalent to 2.2 GB. This makes a bit more sense, and is significantly higher than the point at which my PC code breaks. However, it is still puzzling to me why it does not break closer to the 7.6 GB mark.

---

The full output from Tensor Flow whilst running the above code on my PC, with n = 23000, is:

I tensorflow/stream_executor/cuda/cuda_gpu_executor.cc:900] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero
I tensorflow/core/common_runtime/gpu/gpu_init.cc:102] Found device 0 with properties: 
name: GeForce GTX 780 Ti
major: 3 minor: 5 memoryClockRate (GHz) 1.0455
pciBusID 0000:01:00.0
Total memory: 3.00GiB
Free memory: 2.32GiB
I tensorflow/core/common_runtime/gpu/gpu_init.cc:126] DMA: 0 
I tensorflow/core/common_runtime/gpu/gpu_init.cc:136] 0:   Y 
I tensorflow/core/common_runtime/gpu/gpu_device.cc:717] Creating TensorFlow device (/gpu:0) -> (device: 0, name: GeForce GTX 780 Ti, pci bus id: 0000:01:00.0)
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:51] Creating bin of max chunk size 1.0KiB
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:51] Creating bin of max chunk size 2.0KiB
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:51] Creating bin of max chunk size 4.0KiB
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:51] Creating bin of max chunk size 8.0KiB
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:51] Creating bin of max chunk size 16.0KiB
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:51] Creating bin of max chunk size 32.0KiB
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:51] Creating bin of max chunk size 64.0KiB
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:51] Creating bin of max chunk size 128.0KiB
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:51] Creating bin of max chunk size 256.0KiB
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:51] Creating bin of max chunk size 512.0KiB
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:51] Creating bin of max chunk size 1.00MiB
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:51] Creating bin of max chunk size 2.00MiB
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:51] Creating bin of max chunk size 4.00MiB
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:51] Creating bin of max chunk size 8.00MiB
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:51] Creating bin of max chunk size 16.00MiB
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:51] Creating bin of max chunk size 32.00MiB
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:51] Creating bin of max chunk size 64.00MiB
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:51] Creating bin of max chunk size 128.00MiB
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:51] Creating bin of max chunk size 256.00MiB
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:51] Creating bin of max chunk size 512.00MiB
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:51] Creating bin of max chunk size 1.00GiB
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:51] Creating bin of max chunk size 2.00GiB
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:51] Creating bin of max chunk size 4.00GiB
I tensorflow/core/common_runtime/gpu/gpu_device.cc:717] Creating TensorFlow device (/gpu:0) -> (device: 0, name: GeForce GTX 780 Ti, pci bus id: 0000:01:00.0)
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:73] Allocating 2.03GiB bytes.
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:83] GPU 0 memory begins at 0xb04720000 extends to 0xb86295000
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:431] Bin (256):   Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:431] Bin (1024):  Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:431] Bin (2048):  Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:431] Bin (4096):  Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:431] Bin (8192):  Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:431] Bin (16384):     Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:431] Bin (32768):     Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:431] Bin (65536):     Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:431] Bin (131072):    Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:431] Bin (262144):    Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:431] Bin (524288):    Total Chunks: 2, Chunks in use: 0 819.0KiB allocated for chunks. 390.6KiB client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:431] Bin (1048576):   Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:431] Bin (2097152):   Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:431] Bin (4194304):   Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:431] Bin (8388608):   Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:431] Bin (16777216):  Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:431] Bin (33554432):  Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:431] Bin (67108864):  Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:431] Bin (134217728):     Total Chunks: 1, Chunks in use: 0 68.79MiB allocated for chunks. 29.91MiB client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:431] Bin (268435456):     Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:431] Bin (536870912):     Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:431] Bin (1073741824):    Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:431] Bin (2147483648):    Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:431] Bin (4294967296):    Total Chunks: 0, Chunks in use: 0 0B allocated for chunks. 0B client-requested for chunks. 0B in use in bin. 0B client-requested in use in bin.
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:450] Bin for 877.38MiB was 1.00GiB, Chunk State: 
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:465] Chunk at 0xb0d239400 of size 80128
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:465] Chunk at 0xb0d1d7600 of size 256
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:465] Chunk at 0xb0d24cd00 of size 438528
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:465] Chunk at 0xb0d1d7500 of size 256
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:465] Chunk at 0xb1a3e3200 of size 256
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:465] Chunk at 0xb1a302800 of size 920064
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:465] Chunk at 0xb15d58800 of size 920064
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:465] Chunk at 0xb08cf7500 of size 256
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:465] Chunk at 0xb04736b00 of size 256
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:465] Chunk at 0xb0d2b7f00 of size 256
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:465] Chunk at 0xb15e39200 of size 72128000
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:465] Chunk at 0xb08c16b00 of size 920064
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:465] Chunk at 0xb15c61500 of size 92160
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:465] Chunk at 0xb04736d00 of size 72128000
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:465] Chunk at 0xb0d2b8100 of size 72128000
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:465] Chunk at 0xb15c4ad00 of size 92160
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:465] Chunk at 0xb04736a00 of size 256
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:465] Chunk at 0xb0d2b7e00 of size 256
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:465] Chunk at 0xb0d1d7900 of size 400128
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:465] Chunk at 0xb04720200 of size 92160
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:465] Chunk at 0xb04736c00 of size 256
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:465] Chunk at 0xb08cf7600 of size 72128000
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:465] Chunk at 0xb1a3e3300 of size 1810570496
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:465] Chunk at 0xb0d1c0c00 of size 92160
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:465] Chunk at 0xb08c00300 of size 92160
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:465] Chunk at 0xb0d2b8000 of size 256
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:465] Chunk at 0xb0d1d7800 of size 256
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:465] Chunk at 0xb04720100 of size 256
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:465] Chunk at 0xb0d1d7700 of size 256
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:465] Chunk at 0xb04720000 of size 256
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:465] Chunk at 0xb0d1d7400 of size 256
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:465] Chunk at 0xb11781700 of size 72128000
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:465] Chunk at 0xb15c77d00 of size 256
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:465] Chunk at 0xb15c77e00 of size 920064
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:468]      Summary of in-use Chunks by size: 
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:471] 16 Chunks of size 256 totalling 4.0KiB
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:471] 1 Chunks of size 80128 totalling 78.2KiB
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:471] 5 Chunks of size 92160 totalling 450.0KiB
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:471] 1 Chunks of size 400128 totalling 390.8KiB
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:471] 1 Chunks of size 438528 totalling 428.2KiB
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:471] 4 Chunks of size 920064 totalling 3.51MiB
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:471] 5 Chunks of size 72128000 totalling 343.93MiB
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:471] 1 Chunks of size 1810570496 totalling 1.69GiB
I tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:475] Sum Total of in-use chunks: 2.03GiB
W tensorflow/core/common_runtime/gpu/gpu_bfc_allocator.cc:211] Ran out of memory trying to allocate 877.38MiB.  See logs for memory state
W tensorflow/core/kernels/cwise_ops_common.cc:56] Resource exhausted: OOM when allocating tensor with shape[10000,23000]
W tensorflow/core/common_runtime/executor.cc:1102] 0x50f40e0 Compute status: Resource exhausted: OOM when allocating tensor with shape[10000,23000]
     [[Node: add = Add[T=DT_FLOAT, _device="/job:localhost/replica:0/task:0/gpu:0"](MatMul, Variable_1/read)]]
W tensorflow/core/common_runtime/executor.cc:1102] 0x3234d30 Compute status: Resource exhausted: OOM when allocating tensor with shape[10000,23000]
     [[Node: add = Add[T=DT_FLOAT, _device="/job:localhost/replica:0/task:0/gpu:0"](MatMul, Variable_1/read)]]
     [[Node: range_1/_13 = _Recv[client_terminated=false, recv_device="/job:localhost/replica:0/task:0/cpu:0", send_device="/job:localhost/replica:0/task:0/gpu:0", send_device_incarnation=1, tensor_name="edge_97_range_1", tensor_type=DT_INT32, _device="/job:localhost/replica:0/task:0/cpu:0"]()]]
W tensorflow/core/common_runtime/executor.cc:1102] 0x3234d30 Compute status: Resource exhausted: OOM when allocating tensor with shape[10000,23000]
     [[Node: add = Add[T=DT_FLOAT, _device="/job:localhost/replica:0/task:0/gpu:0"](MatMul, Variable_1/read)]]
     [[Node: Cast/_11 = _Recv[client_terminated=false, recv_device="/job:localhost/replica:0/task:0/cpu:0", send_device="/job:localhost/replica:0/task:0/gpu:0", send_device_incarnation=1, tensor_name="edge_96_Cast", tensor_type=DT_FLOAT, _device="/job:localhost/replica:0/task:0/cpu:0"]()]]
Traceback (most recent call last):
  File "/home/jrowlay/Projects/Tensor_Flow_Tutorial/MNIST_CNN_Simple/memory_test.py", line 232, in <module>
    print(sess.run(accuracy, feed_dict={x: mnist.test.images, y_: mnist.test.labels}))
  File "/usr/local/lib/python2.7/dist-packages/tensorflow/python/client/session.py", line 315, in run
    return self._run(None, fetches, feed_dict)
  File "/usr/local/lib/python2.7/dist-packages/tensorflow/python/client/session.py", line 511, in _run
    feed_dict_string)
  File "/usr/local/lib/python2.7/dist-packages/tensorflow/python/client/session.py", line 564, in _do_run
    target_list)
  File "/usr/local/lib/python2.7/dist-packages/tensorflow/python/client/session.py", line 586, in _do_call
    e.code)
tensorflow.python.framework.errors.ResourceExhaustedError: OOM when allocating tensor with shape[10000,23000]
     [[Node: add = Add[T=DT_FLOAT, _device="/job:localhost/replica:0/task:0/gpu:0"](MatMul, Variable_1/read)]]
     [[Node: range_1/_13 = _Recv[client_terminated=false, recv_device="/job:localhost/replica:0/task:0/cpu:0", send_device="/job:localhost/replica:0/task:0/gpu:0", send_device_incarnation=1, tensor_name="edge_97_range_1", tensor_type=DT_INT32, _device="/job:localhost/replica:0/task:0/cpu:0"]()]]
Caused by op u'add', defined at:
  File "/home/jrowlay/Projects/Tensor_Flow_Tutorial/MNIST_CNN_Simple/memory_test.py", line 215, in <module>
    nn1 = tf.matmul(x, W1) + b1
  File "/usr/local/lib/python2.7/dist-packages/tensorflow/python/ops/math_ops.py", line 468, in binary_op_wrapper
    return func(x, y, name=name)
  File "/usr/local/lib/python2.7/dist-packages/tensorflow/python/ops/gen_math_ops.py", line 44, in add
    return _op_def_lib.apply_op("Add", x=x, y=y, name=name)
  File "/usr/local/lib/python2.7/dist-packages/tensorflow/python/ops/op_def_library.py", line 655, in apply_op
    op_def=op_def)
  File "/usr/local/lib/python2.7/dist-packages/tensorflow/python/framework/ops.py", line 2040, in create_op
    original_op=self._default_original_op, op_def=op_def)
  File "/usr/local/lib/python2.7/dist-packages/tensorflow/python/framework/ops.py", line 1087, in __init__
    self._traceback = _extract_stack()

Solution 1

Judging from the error, tensorflow OOM'ed trying to allocate a [10000, 23000]-sized tensor. Given that 10,000 happens to be the number of examples usually in the MNIST test set, I'm going to assume that you have some evaluation code that attempts to evaluate the whole test set at once. For just the activations you'd need 10000 * (784 + n + 10) ~= 1GB, which by itself shouldn't be enough to OOM. But there's also 1.7GB tensor allocated for some reason which is hard to explain.

For the case on the laptop, you're missing some variables in your calculation. Adam tracks the first and second moments for each variable so the 2.2GB triples to become 6.6GB. Add some overhead for the gradients that will be in memory and that explains that OOM.

I'm sorry this doesn't completely answer your question, I would have added this as a comment but I don't have the reputation for that yet.

Solution 2

Just for your information. I had same error on my Macbook pro. After I closed few of other Applications, that issue is gone. But I still got other errors like:

Blockquote W tensorflow/core/common_runtime/bfc_allocator.cc:217] Ran out of memory trying to allocate 214.51MiB. The caller indicates that this is not a failure, but may mean that there could be performance gains if more memory is available.

So, that's a real out of memory issue.