What exceptions could be returned from Pandas read_sql()
Solution 1
Good question, note, read_sql
is a wrapper around 'read_sql_table and read_sql_query. Reading through the source, a ValueError
is consistently thrown inside the parent and the helper functions. So you can safely catch a ValueError
and handle appropriately. (Do have a look at the source)
Solution 2
I just stumbled on this in a similar problem and found the answer to seek the exception from SQLalchemy..
try:
df = pd.read_sql_query(QUERY, engine)
except sqlalchemy.exc.OperationalError as e:
logger.Info('Error occured while executing a query {}'.format(e.args))
more information can be found here. SQL Alchemy Docs
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user1718097
Updated on October 01, 2022Comments
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user1718097 over 1 year
I have a user-defined function that uses pymysql to connect to a mysql database and then it interrogates the database and reads the results into a Pandas dataframe.
import pandas as pd import pymysql import getpass def myGetData(myQuery): myServer = 'xxx.xxx.xxx.xxx' myUser = input("Enter MySQL database username: ") myPwd = getpass.getpass("Enter password: ") myConnection = pymysql.connect(host=myServer,user=myUser,password=myPwd) myTempDF = pd.io.sql.read_sql(myQuery, con=myConnection) myConnection.close() return myTempDF myDF = myGetData("SELECT * FROM `myDB`.`myTable`")
I have written code to catch exceptions arising from pymysql.connect() although I've not shown it here for clarity. I also want to be able to catch any exceptions that might arise from read_sql(). Where can I find a list of exceptions that might be raised? It's not in the Pandas documentation (http://pandas.pydata.org/pandas-docs/version/0.19.2/generated/pandas.read_sql.html) and I can't find any hints online. I could just catch all exceptions but that seems to be generally frowned upon by the Python community. How should I catch exceptions raised by read_sql()?
EDIT
I've done some more work on this and it seems that even when I know what error is being generated, it's not straight-forward to catch the exception. So, for example, in the code given above, if I enter the username and/or password incorrectly, an operational error is generated. The final line or the error report reads something like:
OperationalError: (1045, "Access denied for user 'yyy'@'xxx.xxx.xxx.xxx' (using password: YES)")
I've been able to catch this error using:
try: phjConnection = pymysql.connect(host=phjServer, user=phjUser, password=phjPwd) except pymysql.OperationalError as e: print("\nAn OperationalError occurred. Error number {0}: {1}.".format(e.args[0],e.args[1]))
That works fine (although discovering that the OperationalError needed to be caught using pymysql.OperationalError was by chance).
Now, in the next part of the function, Pandas function real_sql() uses the connection created above to run a SQL query. If I include a purposely incorrect query that has an incorrect table name, then another OperationalError occurs followed by a DatabaseError:
OperationalError: (1142, "SELECT command denied to user 'yyy'@'xxx.xxx.xxx.xxx' for table 'table'") During handling of the above exception, another exception occurred: DatabaseError: Execution failed on sql 'SELECT * FROM `db`.`table`': (1142, "SELECT command denied to user 'yyy'@'xxx.xxx.xxx.xxx' for table 'table'")
But I am now completely mystified as to how I catch this second OperationalError. The pymysql.OperationalError used previously doesn't work. I've tried almost everything I can think of and still can't catch the error. Shouldn't the error message be a little more informative about how the error was generated and how it can be caught? Clearly, I'm missing something obvious but I just can't find the solution. Any suggestions would be appreciated.
EDIT 2
In response to the comment, I am now catching exceptions as follows:
import pandas as pd import pymysql import getpass def myGetData(myQuery): myServer = 'xxx.xxx.xxx.xxx' myUser = input("Enter MySQL database username: ") myPwd = getpass.getpass("Enter password: ") try: myConnection = pymysql.connect(host=myServer,user=myUser,password=myPwd) except pymysql.OperationalError as e: # Catching this exception works fine if, for example, # I enter the wrong username and password print("\nAn OperationalError occurred. Error number {0}: {1}.".format(e.args[0],e.args[1])) try: myTempDF = pd.io.sql.read_sql(myQuery, con=myConnection) except pymysql.OperationalError as e: # However, this error isn't picked up following an incorrect # SQL query despite the error message saying that an # OperationalError has occurred. # Many variations on this theme have been tried but failed. print("\nAn error occurred. Error number {0}: {1}.".format(e.args[0],e.args[1])) myConnection.close() return myTempDF myDF = myGetData("SELECT * FROM `myDB`.`myTable`")
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user1718097 about 7 yearsThanks for the suggestion...I'll take a look.
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MaxU - stop genocide of UA about 7 yearsIt's a good hint (++). @user1718097, you might also want to check SQLAlchemy exceptions (as Pandas uses this module in the
to_sql()
) in the corresponding source files... -
user1718097 about 7 yearsI've done a bit more work on this problem and added an EDIT to the original question.
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Timothy L.J. Stewart over 2 yearsjust the info I needed, I switch
Operational
toProgramming
for SQL syntax checks. Note: you may also string the except statements as suchexecpt (sqlaclchemy.exc.ProgrammingError, sqlalchemy.exc.OperationalError) as e:
to catch them all